PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00017716-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 196aa MW: 22593.3 Da PI: 10.3066 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.1 | 1.2e-10 | 108 | 159 | 4 | 58 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +++ rr+++NRe+ArrsR RK++ +e+L++ + L+ N ++++++l+ +v++ SMil_00017716-RA_Salv 108 DRKRRRMMSNRESARRSRMRKQKHLENLRNQASRLKLGN---REQANRLRLLVCQ 159 7899***********************************...7999999988876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.6E-8 | 105 | 169 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.427 | 107 | 156 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.4E-7 | 109 | 188 | No hit | No description |
SuperFamily | SSF57959 | 2.34E-7 | 109 | 156 | No hit | No description |
CDD | cd14702 | 6.21E-15 | 110 | 161 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 112 | 127 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
MLSTFPACLS ADAFLGNPFE PGFPPWENHE PPFLFHPHEE PVVFTPQLSH EPVSSNSGSR 60 AQNPALSSGS DDSKRNEPKT LSSGSDDQSR DNFKNKRSGC DETSCVDDRK RRRMMSNRES 120 ARRSRMRKQK HLENLRNQAS RLKLGNREQA NRLRLLVCQT QMFLGENERL RNEAAVLRQR 180 LWEIRQVLVV RQCSNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 108 | 112 | RKRRR |
2 | 108 | 129 | RKRRRMMSNRESARRSRMRKQK |
3 | 121 | 128 | RRSRMRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012856534.1 | 4e-71 | PREDICTED: basic leucine zipper 43 | ||||
TrEMBL | A0A4D8Y077 | 4e-94 | A0A4D8Y077_SALSN; Uncharacterized protein | ||||
STRING | Migut.H00326.1.p | 1e-70 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2820 | 22 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 4e-30 | basic leucine-zipper 6 |