PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

G2-like

Protein Properties

Length: 230aa MW: 26380.4 Da PI: 11.1285

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00017579-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.2	4.3e-29	150	200	2	52
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ SMil_00017579-RA_Salv 150 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQE 200 9*************************************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.2E-14	147	206	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.4E-25	148	205	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.1E-21	150	202	IPR006447	Myb domain, plants
Pfam	PF00249	1.9E-6	151	200	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009944	Biological Process	polarity specification of adaxial/abaxial axis
GO:0048481	Biological Process	plant ovule development
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence Send to blast
MELFPAQPDL SLRISPLNST TSSNWRRGEE EMDLGFWKRA LESRTSLPLS NPARVSDPLT 60 APNHHRILHP RPQLDEEVSL LKPIRGIPVY QNPPSFPFAA HHHQQQRHLE ASFASVNHLA 120 TASVAPYTSQ ALMRSRFLSR FPAKRSMRAP RMRWTTTLHA RFVHAVELLG GHERATPKSV 180 LELMDVKDLT LAHVKSHLQE MWMHLKMGLL GIHQMNSFST FRIHTSLKYL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	6e-15	151	200	4	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	6e-15	151	200	4	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	6e-15	151	200	3	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	6e-15	151	200	3	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	6e-15	151	200	3	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	6e-15	151	200	3	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	6e-15	151	200	4	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	6e-15	151	200	4	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	6e-15	151	200	4	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	6e-15	151	200	4	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	6e-15	151	200	4	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	6e-15	151	200	4	53	Protein PHOSPHATE STARVATION RESPONSE 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269\|PubMed:11525739, ECO:0000269\|PubMed:15286295, ECO:0000269\|PubMed:16623911, ECO:0000269\|PubMed:17307928}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00174	DAP	Transfer from AT1G32240	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024461198.1	2e-79	probable transcription factor KAN2 isoform X3
Swissprot	Q9C616	7e-37	KAN2_ARATH; Probable transcription factor KAN2
TrEMBL	A0A4D8YPP8	1e-102	A0A4D8YPP8_SALSN; Uncharacterized protein
STRING	POPTR_0001s02010.1	2e-78	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2738	22	55

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17695.1	2e-39	G2-like family protein

Publications ? help Back to Top
Machida C,Nakagawa A,Kojima S,Takahashi H,Machida Y The complex of ASYMMETRIC LEAVES (AS) proteins plays a central role in antagonistic interactions of genes for leaf polarity specification in Arabidopsis. Wiley Interdiscip Rev Dev Biol, 2015 Nov-Dec. 4(6): p. 655-71 [PMID:26108442]