 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
SMil_00017291-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
C2H2 |
| Protein Properties |
Length: 275aa MW: 31015.2 Da PI: 8.4957 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00017291-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.8 | 8e-05 | 117 | 139 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+C+ C+++F+++++L H + H
SMil_00017291-RA_Salv 117 SCSVCSQVFPTSHLLSIHVSEaH 139
6*****************99877 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MAMEVEAEVS GTGLNFPLLK PVRRRFGPDA LFFEAGNIER ELLAKQVALD ITDHRTEIQV 60
PKPTEATMAP SDEEKQKIRS MEDWGSSEAF CPIVGCGACL QSLEDFEDHY IARHMASCSV 120
CSQVFPTSHL LSIHVSEAHD SFFQAKVARG FAMYECLVEG CDAKLKSYKS RQQHLVDKHK 180
FPSSFEFFKK SRPSKKQRQK TQRKQAMHKT EDASTAMQVD QENIDSLVSA VSRLSTSESP 240
SSISFGRRHT RGLTFVPRAI QKEKRPGQSS EQLKR
|
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G14140.1 | 2e-79 | zinc ion binding;nucleic acid binding;zinc ion binding |
