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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SMil_00017109-RA_Salv |
Common Name | WRKY50 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family |
WRKY |
Protein Properties |
Length: 223aa MW: 25371.2 Da PI: 6.4032 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00017109-RA_Salv | genome | NDCTCM | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 99.4 | 2.3e-31 | 80 | 138 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY+ eHnh+
SMil_00017109-RA_Salv 80 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSSADPNMLIVTYSCEHNHP 138
69*************************998****************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 223 aa
Download sequence Send
to blast |
LAAQKTMNSN RFSSSHFARE SENSSSPENS EDSPTSAMAK DLKITSKLRR SAVRKKVMSV 60 PIKDIERLRL KGDHVSAPPS DSWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CPARKQVERS 120 SADPNMLIVT YSCEHNHPPP SSRNIHHRPP PPAMSVSEEE LEEEEEEEDE YDEEGEKPRD 180 LVHNQSQELI LDNRFEGNLI CGGEFGWLTD FESTSCMILR VRF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM823173 | 0.0 | KM823173.1 Salvia miltiorrhiza WRKY protein (WRKY50) mRNA, complete cds. |