PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00016149-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 231aa MW: 26018.8 Da PI: 6.1692 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 51 | 3.1e-16 | 125 | 181 | 3 | 59 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 + kr +r+ +NRe+ArrsR+RK+a + Lee v++L +eN +L +++ + ++++++ SMil_00016149-RA_Salv 125 DTKRIKRMVSNRESARRSRRRKQAHLSDLEEQVEQLRGENASLFQQMANASNQYKNA 181 679*****************************************9999999988865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.0E-16 | 123 | 187 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.128 | 125 | 177 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.5E-14 | 126 | 180 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-13 | 127 | 180 | No hit | No description |
SuperFamily | SSF57959 | 1.27E-12 | 127 | 178 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 130 | 145 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MDGKKALLKS RPLFGSRNMK KSESELALEE LFASDQDDKL GGSDQHAFFP IDNLHFNFKN 60 SEIHSSMSSF TENNYPFSAS PNLNPNPPKL STAIDSPLSI CVDSPQSDEE EYMEGDQYNH 120 NPADDTKRIK RMVSNRESAR RSRRRKQAHL SDLEEQVEQL RGENASLFQQ MANASNQYKN 180 AATNNRVLKS DVGALRAKVK LAEDLLARGS LTSSLTHLLH NYLNAPEDDY I |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 139 | 146 | RRSRRRKQ |
2 | 141 | 146 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011082101.2 | 9e-61 | basic leucine zipper 9 | ||||
Swissprot | Q6H500 | 1e-42 | RSBZ4_ORYSJ; bZIP transcription factor RISBZ4 | ||||
TrEMBL | A0A4D8YX71 | 1e-104 | A0A4D8YX71_SALSN; Uncharacterized protein | ||||
STRING | cassava4.1_012780m | 1e-51 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8139 | 22 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 2e-25 | basic leucine zipper 9 |
Publications ? help Back to Top | |||
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