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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SMil_00016070-RA_Salv |
Common Name | WRKY2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family |
WRKY |
Protein Properties |
Length: 526aa MW: 57916.4 Da PI: 7.6015 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00016070-RA_Salv | genome | NDCTCM | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 102.8 | 1.9e-32 | 209 | 266 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgse+prsYY+Ct+a+C++kkkve++ d++++ei+Y+g+Hnh+k
SMil_00016070-RA_Salv 209 DDGYNWRKYGQKQVKGSENPRSYYKCTFANCSMKKKVEKDL-DGQITEIVYKGNHNHPK 266
8****************************************.***************85 PP
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2 | WRKY | 107.6 | 6.3e-34 | 381 | 439 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct+agCpv+k+ver+++dp+ v++tYeg+Hnh+
SMil_00016070-RA_Salv 381 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASHDPRSVITTYEGKHNHD 439
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway |
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 526 aa
Download sequence Send
to blast |
MSSASFTSLL TSDHHSTTTS SAVGRGLGDR IAQRTGSGVP KFKSLPPPSL PITPPSAASP 60 SSWFAIPPGL SPAELLDSPI LLSASNILPS PTTGTYPIQG FGWNSSFNTN QQEESKLERN 120 NFSEFSFQTR KPLTSYNLGE ETWNYQQSAN QNVQSSVDKP ITKSEVKQMQ SYSPEVAAIQ 180 KNDQSCNAAQ IEYNHYNQNQ SSSQNRKSDD GYNWRKYGQK QVKGSENPRS YYKCTFANCS 240 MKKKVEKDLD GQITEIVYKG NHNHPKPQST RRSSSSSSAS SSVHHQSYSA HFNEISEQSY 300 GQDRIDSSAA TPDNSTISIG DDELEQSSQK SRSVGDEIDD EEPHPKRWKC ESENDGVSTV 360 GSRAVREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTA GCPVRKHVER 420 ASHDPRSVIT TYEGKHNHDI PAARGSGNGR PSINAGAAMA TRPTPLPNNS TYPIPVSGLR 480 PSLMEPQPGY GMGSYGYSSF GTYDDALFSR AKDEPKDDLF LESLLC
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator (PubMed:26025535). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:19199048, PubMed:26025535). Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (PubMed:15618416, PubMed:19199048, PubMed:26025535). {ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048, ECO:0000269|PubMed:26025535}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:15618416, PubMed:19199048). Slightly down-regulated by gibberellic acid (GA) (PubMed:15618416). Accumulates in response to jasmonic acid (MeJA) (By similarity). {ECO:0000250|UniProtKB:Q6B6R4, ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM823125 | 0.0 | KM823125.1 Salvia miltiorrhiza WRKY protein (WRKY2) mRNA, complete cds. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Zhang ZL, et al.
A negative regulator encoded by a rice WRKY gene represses both abscisic acid and gibberellins signaling in aleurone cells. Plant Mol. Biol., 2009. 70(1-2): p. 139-51 [PMID:19199048] - Basu S,Roychoudhury A
Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance. Biomed Res Int, 2014. 2014: p. 706890 [PMID:25110688] - Zhang L, et al.
Three WRKY transcription factors additively repress abscisic acid and gibberellin signaling in aleurone cells. Plant Sci., 2015. 236: p. 214-22 [PMID:26025535]
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