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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00013001-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 112aa MW: 13453.4 Da PI: 11.4585 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.4 | 4.3e-15 | 11 | 69 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ rr+q+NRe+ArrsR RK++ ++ L+ ++++L eNk+ k ++ ++++ ++++++ SMil_00013001-RA_Salv 11 RKRRRMQSNRESARRSRMRKQKHLDDLTAEIAQLWRENKQILKSINAGTQQCMRMEAHN 69 56799************************************************999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.7E-12 | 4 | 66 | No hit | No description |
SMART | SM00338 | 2.2E-14 | 7 | 71 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.404 | 9 | 72 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-11 | 10 | 68 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.2E-11 | 11 | 65 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 14 | 29 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 4.69E-16 | 16 | 63 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 112 aa Download sequence Send to blast |
MKMNSSSERE RKRRRMQSNR ESARRSRMRK QKHLDDLTAE IAQLWRENKQ ILKSINAGTQ 60 QCMRMEAHNS VLRAQMMDLS QRLHSLNQFL TAHAPDSFFT THHHPIMAFH YY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 10 | 14 | RKRRR |
2 | 10 | 31 | RKRRRMQSNRESARRSRMRKQK |
3 | 23 | 30 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to specific DNA sequences in target gene promoters. BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000250|UniProtKB:O65683, ECO:0000269|PubMed:29348240}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001287928.1 | 1e-32 | bZIP transcription factor | ||||
Refseq | XP_016568511.1 | 1e-32 | PREDICTED: bZIP transcription factor 53-like | ||||
Swissprot | Q9SI15 | 4e-28 | BZIP2_ARATH; bZIP transcription factor 2 | ||||
TrEMBL | A0A2N9IHH6 | 1e-31 | A0A2N9IHH6_FAGSY; Uncharacterized protein | ||||
STRING | XP_004507475.1 | 4e-32 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA537 | 24 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18160.1 | 1e-22 | basic leucine-zipper 2 |
Publications ? help Back to Top | |||
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