PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00013001-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 112aa    MW: 13453.4 Da    PI: 11.4585
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00013001-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.44.3e-151169563
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                           ++ rr+q+NRe+ArrsR RK++ ++ L+ ++++L  eNk+  k ++  ++++ ++++++
  SMil_00013001-RA_Salv 11 RKRRRMQSNRESARRSRMRKQKHLDDLTAEIAQLWRENKQILKSINAGTQQCMRMEAHN 69
                           56799************************************************999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.7E-12466No hitNo description
SMARTSM003382.2E-14771IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.404972IPR004827Basic-leucine zipper domain
PfamPF001701.6E-111068IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.2E-111165No hitNo description
PROSITE patternPS0003601429IPR004827Basic-leucine zipper domain
CDDcd147024.69E-161663No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    Send to blast
MKMNSSSERE RKRRRMQSNR ESARRSRMRK QKHLDDLTAE IAQLWRENKQ ILKSINAGTQ  60
QCMRMEAHNS VLRAQMMDLS QRLHSLNQFL TAHAPDSFFT THHHPIMAFH YY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11014RKRRR
21031RKRRRMQSNRESARRSRMRKQK
32330RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to specific DNA sequences in target gene promoters. BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000250|UniProtKB:O65683, ECO:0000269|PubMed:29348240}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001287928.11e-32bZIP transcription factor
RefseqXP_016568511.11e-32PREDICTED: bZIP transcription factor 53-like
SwissprotQ9SI154e-28BZIP2_ARATH; bZIP transcription factor 2
TrEMBLA0A2N9IHH61e-31A0A2N9IHH6_FAGSY; Uncharacterized protein
STRINGXP_004507475.14e-32(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18160.11e-22basic leucine-zipper 2
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]