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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
SMil_00011497-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
GATA |
| Protein Properties |
Length: 215aa MW: 23373.9 Da PI: 10.2236 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00011497-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 55.1 | 1e-17 | 143 | 176 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C +C tkTp+WR gp g+ktLCnaCG++y++ +
SMil_00011497-RA_Salv 143 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 176
99*****************************987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 215 aa
Download sequence Send
to blast |
LQGCDTLFSG SPASDLAAEL SVPYEDIVQL EWLSTFVEDS FSGGGLTVGK EKKEQLSPVS 60
VVESSTSSSS SSAVPLSPRH RGPQRARSKR PRPPMFNPRP AIQLISPASS ESNSFAESSP 120
LKKSKKIKIT LPATPTPQPL RKCLHCEITK TPQWRAGPMG PKTLCNACGV RYKSGRLFPE 180
YRPAASPTFV PSLHSNSHKK VIEMRCKVEP MITSL
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