|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
SMil_00010480-RA_Salv |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
Family |
FAR1 |
Protein Properties |
Length: 428aa MW: 48982.9 Da PI: 4.6796 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00010480-RA_Salv | genome | NDCTCM | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 39.8 | 1.5e-12 | 168 | 230 | 1 | 68 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkv 68
++Yn YAke+GF +r+++s k+++++e + ++C++eg+++ ++ ++r+etrtgC a+++
SMil_00010480-RA_Salv 168 NYYNCYAKELGFGIRVKSSWKKRNSKEKRGAVLCCNCEGFKTMKEAC-----TRRKETRTGCLAMIRD 230
69****************************************98776.....8999*********975 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 428 aa
Download sequence Send
to blast |
MADAAVFSPA GDGLSSNSGI EITVDETSEN SEELLDEGVE GFKIEAPDLR TEDSKILKLK 60 SNDLENAIQQ VLGIGRADLE NDGKQVLGIH NVDLQDESEN VLEFERNGHE SNREKMLEIR 120 SNDRDSSSDQ MLGITGNEAG AQNDHTLGKS YLPPVEGMEF ESYDDAYNYY NCYAKELGFG 180 IRVKSSWKKR NSKEKRGAVL CCNCEGFKTM KEACTRRKET RTGCLAMIRD HEWLNSLYEE 240 RERWAPVYLK NSIFAGIFTY QPGEYANPFF HGYLDDQMTW TEFFKVYELL QQKMIQREAL 300 DDVESREFRP VLRTRCSYET QVSELYTKEI FLKFQEEVAL MPGCFSVTRV HVNGPIITCM 360 VKERDDGGDA REARNFEVVY DKIGMEHLYR RAMQVVAEGM ASQDHHMVAW QAFKESLNKV 420 RLAAEKPV
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. May have a role in controlling flowering time. {ECO:0000269|PubMed:15591448}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |