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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00010382-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | NAC | ||||||||
Protein Properties | Length: 317aa MW: 36200 Da PI: 9.6265 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.1 | 1.2e-55 | 10 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPtdeelv +yL+kkv++++++l +vi+++d+y++ePwdL++ ++e+kewyfFs++dkky++g+r+nrat +g+Wka SMil_00010382-RA_Salv 10 VPPGFRFHPTDEELVGYYLRKKVASQRIDL-DVIRDIDLYRIEPWDLQEkcgIGYEEQKEWYFFSHKDKKYPSGTRTNRATMAGFWKA 96 69****************************.9***************953543334778***************************** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 tg+dk+v++ +++l+g++ktLvfykgrap+g+ktdW+mheyrl SMil_00010382-RA_Salv 97 TGRDKAVYD-RSKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRL 138 *********.999****************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.22E-57 | 4 | 143 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.669 | 10 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.1E-29 | 11 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence Send to blast |
MMDSAAECCV PPGFRFHPTD EELVGYYLRK KVASQRIDLD VIRDIDLYRI EPWDLQEKCG 60 IGYEEQKEWY FFSHKDKKYP SGTRTNRATM AGFWKATGRD KAVYDRSKLI GMRKTLVFYK 120 GRAPNGQKTD WIMHEYRLDS ELNSPPQACF FLPSLFISFQ KHTHTYNIKY IKLILRDGER 180 ISDRFGGDAR KGDDGGFSHI SRSWASKGRT TKKGRVFDSS IKHRLRRIIK NGMNMSKSRA 240 DGAVLQGAGA HFVSSSPVEF LNKVQHAQNG GAILQNFVIH SSSDAARAMS VVVSKRWGDM 300 LDDDDSLDED ESLNIFS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-52 | 3 | 138 | 8 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021908313.1 | 3e-99 | NAC domain-containing protein 37-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA134 | 24 | 297 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36160.1 | 2e-82 | NAC domain containing protein 76 |