 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
SMil_00010274-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
bHLH |
| Protein Properties |
Length: 262aa MW: 29141.3 Da PI: 6.8733 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00010274-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 40.5 | 5e-13 | 77 | 124 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
r+h+e+ErrRR+riN +e Lr l+P++ +K++Ka+ L +++ Ik+L+
SMil_00010274-RA_Salv 77 RSHSEAERRRRERINAHLESLRGLVPNN-----EKMDKATLLAEVISQIKQLR 124
68*************************8.....8*****************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MMHCENQYGF NIESDGGEFV NQLLHNSSKN VENRSCLLMP VKQSLVLDGE KGELVKASGR 60
MGKRIGVSET KTVEALRSHS EAERRRRERI NAHLESLRGL VPNNEKMDKA TLLAEVISQI 120
KQLRTTASQA SEGLHIPIDT DELKVETLEN HTGDGMFLLR ASLCCEHLPD LLSDVRQVIN 180
SLPIRVLKSE ISTLGSRVKI AFLITTVEGN DSVREFVVGS VRAALSNVLE KVSALAESAE 240
QLFIPRKRQR VSCLDSSSYL FE
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KP257555 | 0.0 | KP257555.1 Salvia miltiorrhiza clone 123 basic helix-loop-helix transcription factor mRNA, complete cds. |
