PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00010240-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 584aa    MW: 64257.9 Da    PI: 7.4144
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00010240-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.87.2e-11420478563
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            kr++r   NR +A rs +RK  +i+eLe kv++L++e ++L  +l  l+  ++ l+s++
  SMil_00010240-RA_Salv 420 KRAKRILANRQSAARSKERKMRYIAELEHKVQTLQTEATTLSAQLTLLQRDSSGLTSQN 478
                            9*************************************************999999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-18416480IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.875418481IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-11420470No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-10420477No hitNo description
PfamPF001709.5E-10420478IPR004827Basic-leucine zipper domain
CDDcd147031.25E-24421470No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    Send to blast
LKKMAGDNEE ANTQRLQSSF GTSSSSFPKQ QQHQSFMMNQ MDIPQLTMPQ FRGQIRQNSP  60
NLGIENNGKR VGIPPSHPQI PPISPYSQIP VNRQTGMQNF STSPGPSHSR SLSQPSFFAL  120
DSLPPLSPSP YRELHSNSVA DHVSADVSME ERDGSSHSLL PPSPFVRGNS MRIGESLPPR  180
KAHRRSNSDI PFGFMSVLQS SPPLMPLRSS AGENQGSQLQ QQPAQLIKKE SCWEKGVDEG  240
IGERKSEGEV VDDLFSAYMN LDNIDAFNSS GTDEKLGNEN REDLDSRASG TKTNGGDSSD  300
NEATSSSVNE SGNSAQKQGV SSLPEKRDGL KRNAGGDIAP TSRHYRSVSM DSFMGKINFG  360
DESPKMPPSP GNLQTSPTNS MDGNSNAFSL EFGNGEFTGA ELKKIMANEK LSEIALSDPK  420
RAKRILANRQ SAARSKERKM RYIAELEHKV QTLQTEATTL SAQLTLLQRD SSGLTSQNNE  480
LKFRLQAMEQ QAQLRDGIVP LPIVSFPLSM CHFRLIQLLL RTRNLSNHAC MPCLHYKTFT  540
MCSTSSSPPP PLPVDQIYSL HSWNSFLVLH ECLSLVIQDY GFSL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088545.10.0uncharacterized protein LOC105169746
RefseqXP_011088546.10.0uncharacterized protein LOC105169746
TrEMBLA0A4D8ZGT10.0A0A4D8ZGT1_SALSN; Uncharacterized protein
STRINGXP_009804619.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12652478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-127bZIP family protein