PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00009264-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

bZIP

Protein Properties

Length: 405aa MW: 45684.3 Da PI: 9.3685

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00009264-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.9	1.9e-07	272	318	17	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+a+ ++ ele l+++ l +e+ SMil_00009264-RA_Salv 272 AQRSRVRKLQYIAELERHVQALQAKGSEISAELEFLNQQNLILSMEN 318 89***********************************9998887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0016	261	320	IPR004827	Basic-leucine zipper domain
CDD	cd14703	5.76E-15	263	311	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.8E-5	272	315	No hit	No description
SuperFamily	SSF57959	2.38E-5	272	314	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence Send to blast
MPCRRRGCDY EPLICLRWLD VMILVLASSA MSNSKGPSTV RNMMYNGKNP LLPPKSPFPS 60 ISPSYAEYIP TSVIGPKALP KPRDGSPHHQ RTSSESFLIE EQPSWLDELL DEPETPVRKG 120 GHRRSSSDSF AYIDTANAGS MNYAAQDDIK FKNMIPLPSW GSQDFDFQRD MRQSSFYLDS 180 NPSGRTKNKP WDAPVNSIAP PRSLPSRDVA TIQNAGTVNT SLDVDRNPTS SAQKSDVESV 240 SQDPKGSFEK KDTHVKNLAS ETDTKRAKQQ FAQRSRVRKL QYIAELERHV QALQAKGSEI 300 SAELEFLNQQ NLILSMENKA LKQRLESLSQ EQLIKYFEHE VLEREAGRLR GLYQQQQKPP 360 QPQQQISSSH RRAKSRDLDQ QLANLSLKLK ETSSGQDSLS SQLHM

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence Send to blast

MPCRRRGCDY EPLICLRWLD VMILVLASSA MSNSKGPSTV RNMMYNGKNP LLPPKSPFPS  60
ISPSYAEYIP TSVIGPKALP KPRDGSPHHQ RTSSESFLIE EQPSWLDELL DEPETPVRKG  120
GHRRSSSDSF AYIDTANAGS MNYAAQDDIK FKNMIPLPSW GSQDFDFQRD MRQSSFYLDS  180
NPSGRTKNKP WDAPVNSIAP PRSLPSRDVA TIQNAGTVNT SLDVDRNPTS SAQKSDVESV  240
SQDPKGSFEK KDTHVKNLAS ETDTKRAKQQ FAQRSRVRKL QYIAELERHV QALQAKGSEI  300
SAELEFLNQQ NLILSMENKA LKQRLESLSQ EQLIKYFEHE VLEREAGRLR GLYQQQQKPP  360
QPQQQISSSH RRAKSRDLDQ QLANLSLKLK ETSSGQDSLS SQLHM

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087712.1	0.0	uncharacterized protein At4g06598
Refseq	XP_011087714.1	0.0	uncharacterized protein At4g06598
Refseq	XP_011087715.1	0.0	uncharacterized protein At4g06598
Refseq	XP_011087716.1	0.0	uncharacterized protein At4g06598
TrEMBL	A0A4D8ZDJ9	0.0	A0A4D8ZDJ9_SALSN; Uncharacterized protein
STRING	Migut.N00836.1.p	1e-166	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2765	17	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.2	1e-100	bZIP family protein