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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00007531-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | G2-like | ||||||||
Protein Properties | Length: 437aa MW: 48721.1 Da PI: 7.3423 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 38 | 3.6e-12 | 125 | 153 | 27 | 55 |
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 Pk+il+lm+v+ Lt+e+v+SHLQkYRl SMil_00007531-RA_Salv 125 VGPKKILDLMGVPWLTRENVASHLQKYRL 153 56**************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50110 | 13.823 | 1 | 63 | IPR001789 | Signal transduction response regulator, receiver domain |
SuperFamily | SSF52172 | 2.28E-7 | 15 | 70 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 3.7E-11 | 22 | 70 | No hit | No description |
SuperFamily | SSF46689 | 1.56E-6 | 123 | 157 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.8E-13 | 123 | 158 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.5E-10 | 125 | 153 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 437 aa Download sequence Send to blast |
MTHCISTATF RVYHQETKPY IYAVMSVDGE TSRVMKGVQH GACDYLLKPI RMKELRNIWQ 60 HVFRKRIHEV RDIEGHESLD EMMLRGGADL SDDGFFVRWG SSLWGRRGKT LITRFVSLTA 120 FVAEVGPKKI LDLMGVPWLT RENVASHLQK YRLYLSRLQK ENELRATLGG AKLSDSSPKD 180 AAAGGNAGLQ TPVTKASPCL KHDDPKSCEG NVKSMPIAEA KAAAELSSDA KSEPNIQVQY 240 SWSAGAPPLP FKHEQKPPAA FKHEPKPPLQ FKKEQPLFIA EHHRFDHVPV AVAVQSKPSD 300 TPSPAATSKR SQHSEKATKV ESTAALFCLQ PESHLADSHT TIWNTKSSSQ SLESLYDESW 360 HRNALVGTGS PLMSDYSSQS DLYPPNPYLG PIDPFSFNGQ ELFTDVHSHL YDSLKFNPEF 420 PIDPVEYPVI DQGVYIA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011071178.1 | 1e-129 | two-component response regulator ORR26 | ||||
TrEMBL | A0A4D8ZX82 | 1e-171 | A0A4D8ZX82_SALSN; Two-component response regulator ARR-B family |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6788 | 24 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 2e-51 | response regulator 11 |