 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
SMil_00007166-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
bHLH |
| Protein Properties |
Length: 261aa MW: 29933.1 Da PI: 6.0556 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00007166-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 43.8 | 4.8e-14 | 102 | 147 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
h+ +Er+RR++i ++f+ L l+P + kK++Ka+iLe A+eY+k L
SMil_00007166-RA_Salv 102 DHSLAERKRREKIGKRFAALSALVPGL-----KKMDKASILEDAIEYMKLL 147
699************************.....9***************988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MEISGFRNLA DLVNQHVNDA LPVDFQSSFY EGLSHNFEQA CEYDDRPLKQ FRTSSHTPAT 60
TLQFDVIPTC DGVVWMNPKD EALVASKPIP FHQHHSHNKL ADHSLAERKR REKIGKRFAA 120
LSALVPGLKK MDKASILEDA IEYMKLLEEK VKGLEEKARK RSMESAVVFT INKDDEDEDD 180
FPIIRARFYD KEMLISIHCK RGRRVFEKIV GEIENLQFSI VNSSLMTYGD SSLSITLIAL 240
AQQKNDEEDS MSMEQLVRNL R
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 106 | 111 | ERKRRE |
| 2 | 107 | 112 | RKRREK |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KP257508 | 0.0 | KP257508.1 Salvia miltiorrhiza clone 75 basic helix-loop-helix transcription factor mRNA, complete cds. |
