PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00007005-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 473aa MW: 51828.1 Da PI: 6.8861 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.5 | 3.9e-10 | 188 | 231 | 4 | 47 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 k+ rr+++NReAAr+sR RKka++++Le+ +L++ ++Lkk SMil_00007005-RA_Salv 188 QKALRRLAQNREAARKSRMRKKAYVQQLENSRLKLTQLEQELKK 231 5889**************************99999988888875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.5E-8 | 185 | 249 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.507 | 187 | 231 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.9E-6 | 189 | 231 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 1.60E-20 | 189 | 238 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.5E-8 | 189 | 232 | No hit | No description |
SuperFamily | SSF57959 | 3.75E-7 | 189 | 232 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 192 | 207 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.5E-30 | 272 | 345 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009909 | Biological Process | regulation of flower development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence Send to blast |
MHSFKSAVTQ AIALTSSDVY CHSQSPFYLR GEEGGRNGAR FSDLGELEQS AGNGFHHDDA 60 VNLSRSSMYN DLKASNVSVV SSNLQFGGLN NSLGSAEMVS SATGVDSGQF MSHKGTIVGL 120 CGGGGGGGGA MGNGQFENWG DSGVVADHSQ QTDTSTDTDD KNQYPGVHNE RLMGVDSMDQ 180 LNGKIGDQKA LRRLAQNREA ARKSRMRKKA YVQQLENSRL KLTQLEQELK KVRQQGMFAA 240 SGFHADNSLG GNGALAFDID YARWLDEHHR LINDLRTAVN SHVGDSELRL LVEGVMSHYD 300 EIFRLKSVGA KSDVFHMLSG MWKTPAERCF MWLGGFRCSE VLKILGNQIE PLTDQQLVAM 360 CNLQQSSQQA EDALSQGMEA LQQSLVETLS SNTLAPRNSA NVADYMGQMA IAMSKLATLE 420 NFLHQADLLR QQTLQQLQRI LTTRQAARAL LAISDYRSRL RALSSLWLAR PKE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011077152.1 | 0.0 | transcription factor HBP-1b(c38)-like | ||||
Swissprot | Q41558 | 1e-165 | HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment) | ||||
TrEMBL | A0A4D9A4X8 | 0.0 | A0A4D9A4X8_SALSN; Transcription factor TGA | ||||
STRING | EOY02112 | 0.0 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA820 | 23 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 1e-127 | bZIP family protein |