PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00007000-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 244aa MW: 26697.9 Da PI: 4.5241 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.7 | 1.2e-13 | 125 | 176 | 4 | 55 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 l++ + +++NRe+ArrsR+RK++ +eeL v+eL +N++ l +++ SMil_00007000-RA_Salv 125 LRKRKWMISNRESARRSRLRKQKHMEELMAQVAELRRQNHQILTSLRATTQH 176 7788889*********************************988776666555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-10 | 115 | 171 | No hit | No description |
SMART | SM00338 | 7.8E-16 | 122 | 186 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.289 | 124 | 170 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.6E-11 | 125 | 170 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.18E-10 | 126 | 176 | No hit | No description |
CDD | cd14702 | 1.66E-18 | 127 | 177 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 129 | 144 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MQELKRKTIA EIRLYAGDFT ALLLLPSGES DFSGGRDSSG ESDFSGEQDS SGENGSSGEY 60 DSSGDDGPSG EYDSSGEDGS SGECASSGED DSSSEYDSFD EICLAAPRDS TDSASKEDLQ 120 KTMDLRKRKW MISNRESARR SRLRKQKHME ELMAQVAELR RQNHQILTSL RATTQHHIAV 180 ESENAASDLG FPQQNPLAPP PEFNPLLDHS SADQAQSPLP PPPQLVLRHH VVVFRRSRAA 240 VDQA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 125 | 146 | RKRKWMISNRESARRSRLRKQK |
2 | 138 | 144 | RRSRLRK |
3 | 138 | 145 | RRSRLRKQ |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA537 | 24 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.2 | 8e-22 | basic leucine-zipper 44 |