|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
SMil_00006712-RA_Salv |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
Family |
WRKY |
Protein Properties |
Length: 305aa MW: 33871.9 Da PI: 6.8727 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00006712-RA_Salv | genome | NDCTCM | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 108 | 4.5e-34 | 146 | 204 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+s+fprsYYrCts+ C vkk+vers++dp++v++tYeg+H+h+
SMil_00006712-RA_Salv 146 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSPACGVKKRVERSSDDPSIVVTTYEGTHTHS 204
59********************************************************7 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009624 | Biological Process | response to nematode |
GO:0009733 | Biological Process | response to auxin |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MEEEKRKEAA AKASSNNQSM MINQEISSGS LFDISYAEAE ADHLLQKNCS LGFMDVQDFS 60 CPSSAFDDLL HNMVSEPPPE VLTNPATPNA SSISSSSTEA DRKKNDEEEQ EEANKSRKQL 120 KLKKKNQKRQ RDPRFAFMTK SEIDHLDDGY RWRKYGQKAV KNSPFPRSYY RCTSPACGVK 180 KRVERSSDDP SIVVTTYEGT HTHSCPITPR GAAAGFGVIP IEASAFHGGA SSSLFDMPQI 240 LDYPRPLQQQ RPYFTNLTLQ PPPLSNNANS RVPPPFLSAA AAATRDHGLL QDMLPSEMLK 300 EPKGE
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KM823127 | 0.0 | KM823127.1 Salvia miltiorrhiza WRKY protein (WRKY4) mRNA, complete cds. |