PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00006418-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 253aa MW: 28226 Da PI: 10.2745 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.9 | 8.9e-08 | 200 | 251 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHH........HHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeie........eLeekvkeLeaeNkaLkke 48 +r rrk+kNRe+A rsR+RK+a++e eL +kv Le+eN++Lkke SMil_00006418-RA_Salv 200 RRLRRKIKNRESAARSRARKQARLEfhsqayhnELVTKVSRLEEENSKLKKE 251 688*****************99876555555559999999999999999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.4E-9 | 195 | 251 | No hit | No description |
SMART | SM00338 | 0.0079 | 196 | 253 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 7.54E-14 | 200 | 250 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 203 | 218 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence Send to blast |
MGIQTMNSHV SGGGQQSHVQ HPLQRCNSWL GLTLDQVERH LLGNLAKPLG SMNLDELLKK 60 VWTTDSSHSS GMESVETSPA ASLQRQASWS LARAFTGKTV NEVWRDIQLG YKMSNVEGLR 120 SQTLGETTLE DFLVKAGMYV SNAPSVSIEP VMSLDSALKS HKFSSQMGLL SPSPSIDELS 180 DTPLPGRKRM SGDLEKTIER RLRRKIKNRE SAARSRARKQ ARLEFHSQAY HNELVTKVSR 240 LEEENSKLKK EKA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011090205.1 | 1e-130 | ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X2 | ||||
TrEMBL | A0A4D8Y1W8 | 1e-165 | A0A4D8Y1W8_SALSN; ABA responsive element binding factor | ||||
STRING | Migut.N02398.1.p | 1e-96 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12596 | 16 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 1e-32 | ABA-responsive element binding protein 3 |