PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00003402-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 336aa MW: 37505 Da PI: 6.3516 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.2 | 1.7e-08 | 195 | 247 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 kr++r NR +A rs +RK +i+eL+ kv++L++ +L + +++ SMil_00003402-RA_Salv 195 KRAKRIWANRQSAARSKERKMRYIAELQSKVQSLQTDKASLSMQFALMQEDTN 247 9***********************************99999877766666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-11 | 191 | 255 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.4E-7 | 192 | 242 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.0E-7 | 193 | 249 | No hit | No description |
PROSITE profile | PS50217 | 9.714 | 193 | 256 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.03E-10 | 195 | 249 | No hit | No description |
CDD | cd14703 | 4.43E-18 | 196 | 245 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence Send to blast |
LMNMNSRSWL PPLGRSSVSS YSTKPEQSAS SNLRPIGPEC SFKKEHKMSS HSSQFSFEIS 60 RMPENPPNNL AHRRTHSDVL ALLNDVSFDG DLGIVGGSDG LSVFDDTEED LLPEYFVLDK 120 SNLISETMEE LSTSAADAGS SCIQQRKLQH SQSMVLKSCI KTEMAKPGSE NPSSAESDKS 180 ISAANLAELA LTDPKRAKRI WANRQSAARS KERKMRYIAE LQSKVQSLQT DKASLSMQFA 240 LMQEDTNCLA SENIELKLQL QSFEQQVHLQ DAVNDALKEE IQHLKVLTGQ AMLNGPAPPP 300 YGTNQNYNTN SHAQPLQYQF RQHQLDQFQP RQLLLH |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011091638.1 | 1e-115 | probable transcription factor PosF21 | ||||
Refseq | XP_011091639.1 | 1e-115 | probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 9e-80 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A4D8XNJ8 | 1e-169 | A0A4D8XNJ8_SALSN; Uncharacterized protein | ||||
STRING | Migut.G01348.1.p | 1e-106 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA20447 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 2e-91 | bZIP family protein |
Publications ? help Back to Top | |||
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