 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
SMil_00003183-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
Dof |
| Protein Properties |
Length: 337aa MW: 35816.8 Da PI: 9.5131 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00003183-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 123.8 | 5.5e-39 | 74 | 133 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
e++lkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
SMil_00003183-RA_Salv 74 ETSLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 133
6789*****************************************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009640 | Biological Process | photomorphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MVFSSIPAYL DPSNWNQQQN HQIIGSSSAN PLLPPPPHPG GPPPPPPPQP HGGGGIRPGS 60
MAERARMANI PMPETSLKCP RCESTNTKFC YFNNYSLSQP RHFCKTCRRY WTRGGALRNV 120
PVGGGCRRNK RSKSSNSKSP ASSDRQANNN PSSTSTVSTN SNSAAANMLG LTPPLPPLRF 180
MSPLGQFTDN FTADMGLNYS AIAASTVGTS DMNFHGAGSL LGGSGSGGVA SLLSSEGGGI 240
EPWRLQQVQQ FPFLDASSQG FYQFHGGEAG FLGGGEARPK LSSPMMSQRP PVKMEDNNAE 300
NNLTRQILGG NEQWNAPTTA NWTDLSSFSS SSTSNPL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB493581 | 4e-36 | AB493581.1 Arabidopsis thaliana At2g37590 mRNA for hypothetical protein, partial cds, clone: RAAt2g37590. |
| GenBank | AC004684 | 4e-36 | AC004684.3 Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete sequence. |
| GenBank | BT030014 | 4e-36 | BT030014.1 Arabidopsis thaliana At2g37590 mRNA, complete cds. |
| GenBank | CP002685 | 4e-36 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |
