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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
SMil_00003007-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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| Family |
Trihelix |
| Protein Properties |
Length: 173aa MW: 20058.1 Da PI: 7.8226 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00003007-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 79.7 | 4.1e-25 | 46 | 129 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+ +e+++ +++r +++ ++ ++k++k lWe vs +m + g++r+p+qCk+kw+nl +ryk ++++e+ + +++ +p++++++
SMil_00003007-RA_Salv 46 QWSSEETRDFLAIRGDLDPTFMETKRNKLLWELVSTRMNQIGYNRTPIQCKCKWKNLVTRYKGCETMEEVE--MRERAFPFYKEMQ 129
7********************************************************************85..56667******96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 173 aa
Download sequence Send
to blast |
LVDFLIFKIK LFIFMYMDHS QFSQVQNPYV GVSVETGLGC GDRNPQWSSE ETRDFLAIRG 60
DLDPTFMETK RNKLLWELVS TRMNQIGYNR TPIQCKCKWK NLVTRYKGCE TMEEVEMRER 120
AFPFYKEMQI IFNARMQRMM WQEVEGGAIS PQMVSKAANS GCSSGNSSAV VMD
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may play a role in the induction of CAM4 in response to pathogen and salt. {ECO:0000269|PubMed:15310827}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salt and infection with the bacterial pathogen P.syringae pv tomato. {ECO:0000269|PubMed:15310827}. |
