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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SMil_00002787-RA_Salv |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family |
WRKY |
Protein Properties |
Length: 523aa MW: 57014.9 Da PI: 8.7126 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SMil_00002787-RA_Salv | genome | NDCTCM | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 109.3 | 1.9e-34 | 243 | 299 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers d++++ei+Y+g+Hnh+
SMil_00002787-RA_Salv 243 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPSCPVKKKVERSL-DGQITEIIYKGQHNHP 299
8****************************************.***************8 PP
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2 | WRKY | 107.1 | 8.6e-34 | 411 | 469 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k+ver+a+dpk+v++tYeg+Hnh+
SMil_00002787-RA_Salv 411 LDDGYRWRKYGQKVVKGNPYPRSYYKCTTAGCNVRKHVERAASDPKAVITTYEGKHNHD 469
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 523 aa
Download sequence Send
to blast |
LQNDDFEKLE TQKSKGFKTP KKQSKVKVRL NPMAGNKPPP SSSSSKPPPS ITLPPRTSIE 60 SLFTGGAGAS PGPMSLVSSF FAENDPDNDC RSFSQLLAGA VQSTADEFRF QQNRPAGLAV 120 SHPPGAGTFT VPPGLSPATL LDSPDLFCSS QGHFGLSHHQ ILAQISGQAQ AQAQAQMQFQ 180 YSSFPSAPAS SISHMQPIPS NASFQQHIPP PLPDTKNIKE SSDFSQSDQK FQPANFAVDK 240 PTDDGYNWRK YGQKQVKGSE FPRSYYKCTH PSCPVKKKVE RSLDGQITEI IYKGQHNHPQ 300 PSKRPKDSGG SNGTMNPQRS SEFGGDRLSK PEEGGAKDQG SSQLTPEQVS GSSDSEEVAG 360 GETRVDDGHE DEPESKRRIV EVQNPEQASS SHRTVTEPRI IVQTTSEVDL LDDGYRWRKY 420 GQKVVKGNPY PRSYYKCTTA GCNVRKHVER AASDPKAVIT TYEGKHNHDV PAAKNSSHGN 480 ANAATQFRPQ NPVANRPAAS RGIEYGNEQQ SVALLRFKEE QIT
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM823177 | 0.0 | KM823177.1 Salvia miltiorrhiza WRKY protein (WRKY54) mRNA, complete cds. |