PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00002101-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

EIL

Protein Properties

Length: 683aa MW: 76179.3 Da PI: 5.4753

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00002101-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	168.3	8.3e-52	195	308	1	122
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegas 88 eel+krmwkd+++lkr+ker+k ++k++a+ +++qarrkkm+raQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gas SMil_00002101-RA_Salv 195 EELEKRMWKDRVRLKRIKERQKL--AEKQKAI------STTDQARRKKMARAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGAS 274 8************99999985..3444434......5679****************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 89 dsLraWWkekvefdrngpaaiskyqaknlilsge 122 d++r+WWkekv+fd+ng aai+ky+a++l +++ SMil_00002101-RA_Salv 275 DNIREWWKEKVKFDKNGLAAIAKYEAECLSREDG 308 **********************9998865554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF53098	2.4E-11	13	139	IPR012337	Ribonuclease H-like domain
Gene3D	G3DSA:3.30.420.10	4.4E-6	13	138	IPR012337	Ribonuclease H-like domain
CDD	cd06222	4.08E-13	18	136	No hit	No description
Pfam	PF13456	1.0E-17	18	138	No hit	No description
Pfam	PF04873	8.6E-51	195	307	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003676	Molecular Function	nucleic acid binding

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence Send to blast
MLASASACSR AGQVKLWCDA AVKEQEGLGF GVIMQDREGG LVGSRFGFIL GVFTPIEAEA 60 MAVWEGIRLC DERLIQDAIL VMDCQLLYWK LLKKARDNSY LGQMLSEIHR KAAALYHLEF 120 GWTPREGNDN ADRLAKFAKS SKFSRGFSGG LGNRLDMAVM EDVGVDISSD IEVDEMRGHG 180 NIEEKDVSDE EIEAEELEKR MWKDRVRLKR IKERQKLAEK QKAISTTDQA RRKKMARAQD 240 GILKYMLKLM EVCKARGFVY GIIPEKGKPV SGASDNIREW WKEKVKFDKN GLAAIAKYEA 300 ECLSREDGVG RGYKKRPSVE SDSDYDVDGV DNGLGSVSSK DDRNQSLAGV PVETRVQAEK 360 KLGKNKKHVV GRQRKRLKSS ADNLQAIPSL NESQDVHEDM VICVNNDNTQ LNGYLAVESQ 420 PELNGLTTLI PQENNAEKQS CTVEPNSNYR SFLQPSNSVP IRSLTPDNEQ FPYTMDQSAD 480 LMGQGPHVIQ NPQDTRLHNK PQIPEVHDER QSSVLRHGVQ DPGLGKGPQN SVWKHGGQDS 540 TLPEGSQTRS LHHGLTYHQH FYNPTTAAGS SHQELQSEAS FIELQYKVED SRLHLPRNDN 600 DIAGGGFQEF VKDAFPHEPE RNVVGAQFPS PLSSLTPDLP GYSPFSLQFD GTSSLDTGDF 660 EFGIDVDTVD DNNLAELMKY FAS

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence Send to blast

MLASASACSR AGQVKLWCDA AVKEQEGLGF GVIMQDREGG LVGSRFGFIL GVFTPIEAEA  60
MAVWEGIRLC DERLIQDAIL VMDCQLLYWK LLKKARDNSY LGQMLSEIHR KAAALYHLEF  120
GWTPREGNDN ADRLAKFAKS SKFSRGFSGG LGNRLDMAVM EDVGVDISSD IEVDEMRGHG  180
NIEEKDVSDE EIEAEELEKR MWKDRVRLKR IKERQKLAEK QKAISTTDQA RRKKMARAQD  240
GILKYMLKLM EVCKARGFVY GIIPEKGKPV SGASDNIREW WKEKVKFDKN GLAAIAKYEA  300
ECLSREDGVG RGYKKRPSVE SDSDYDVDGV DNGLGSVSSK DDRNQSLAGV PVETRVQAEK  360
KLGKNKKHVV GRQRKRLKSS ADNLQAIPSL NESQDVHEDM VICVNNDNTQ LNGYLAVESQ  420
PELNGLTTLI PQENNAEKQS CTVEPNSNYR SFLQPSNSVP IRSLTPDNEQ FPYTMDQSAD  480
LMGQGPHVIQ NPQDTRLHNK PQIPEVHDER QSSVLRHGVQ DPGLGKGPQN SVWKHGGQDS  540
TLPEGSQTRS LHHGLTYHQH FYNPTTAAGS SHQELQSEAS FIELQYKVED SRLHLPRNDN  600
DIAGGGFQEF VKDAFPHEPE RNVVGAQFPS PLSSLTPDLP GYSPFSLQFD GTSSLDTGDF  660
EFGIDVDTVD DNNLAELMKY FAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	359	376	KKLGKNKKHVVGRQRKRL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011090401.1	1e-124	ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBL	A0A4D9ABF5	1e-169	A0A4D9ABF5_SALSN; Ethylene-insensitive protein 3
STRING	Migut.N02294.1.p	3e-82	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA304	23	178

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	3e-59	ETHYLENE-INSENSITIVE3-like 3