 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
SMil_00001370-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
bHLH |
| Protein Properties |
Length: 238aa MW: 27199.9 Da PI: 9.8645 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00001370-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 39.1 | 1.3e-12 | 69 | 120 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
rr+ h +Er+RR+++ + + Lr+llP +++K s ++ e+A++YIk++
SMil_00001370-RA_Salv 69 RRVLHRDIERKRREEMSKLYVSLRTLLPMeH---NKGKSSVSDQMEEATKYIKQM 120
7999*************************66...*******************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 238 aa
Download sequence Send
to blast |
LRSKLNMFSF QPCDELPFPI QTTPQNYQIS EGNLISFSAT TTKEEQLIGA SNSRSPKQKG 60
QIRYGSYNRR VLHRDIERKR REEMSKLYVS LRTLLPMEHN KGKSSVSDQM EEATKYIKQM 120
HEKIEKLRSQ RDKLKKLHNS SSSSCGTNVE SSYDRNGLHN SVAVQRVMDG LEILITNKSP 180
QFELSHVLAQ LSERELDVVS CVSTTTNGGF LHKILIKASN RTCLDVWGLH DRLSDTIK
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 76 | 81 | ERKRRE |
| 2 | 131 | 136 | DKLKKL |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KP257526 | 0.0 | KP257526.1 Salvia miltiorrhiza clone 93 basic helix-loop-helix transcription factor mRNA, complete cds. |
