PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00001261-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | NAC | ||||||||
Protein Properties | Length: 227aa MW: 26249.3 Da PI: 9.8935 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 109.4 | 4e-34 | 15 | 150 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...............kvkaeekewyfFskrdkkyatgkr 73 lp GfrFhPtdeel+ +yLk+kv +l++ +vi+e++ ++++PwdLp +++ +++ yfF+kr+++ + SMil_00001261-RA_Salv 15 LPIGFRFHPTDEELLLHYLKRKVLCLPLPA-TVIPELEAFHFNPWDLPGyllflfahfmvfyfqDLSELKEKRYFFCKRKRNLMN--- 98 699***************************.99***************5589999999988765444455678******997643... PP NAM 74 knratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +t+ gyWk++gk k+++ + +++++g+kk++vfy+ r+ +kt+W+m+e++l SMil_00001261-RA_Salv 99 -KCSTDCGYWKSSGKGKQIVGAeTNNVIGMKKSFVFYQDRK---SKTQWIMQEFSL 150 .447899************99867788**********6554...46********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.58E-37 | 13 | 178 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 41.4 | 15 | 178 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-24 | 16 | 150 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MERARSEGEN GGVKLPIGFR FHPTDEELLL HYLKRKVLCL PLPATVIPEL EAFHFNPWDL 60 PGYLLFLFAH FMVFYFQDLS ELKEKRYFFC KRKRNLMNKC STDCGYWKSS GKGKQIVGAE 120 TNNVIGMKKS FVFYQDRKSK TQWIMQEFSL VGFLKTPLLN QRVAMQVGDW VVCRLFQRKR 180 RPRNHSNNSK NELGVSIAQT TSCSSGITHI SCSDLDQEAS SRSATFL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-30 | 5 | 179 | 5 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012844037.1 | 1e-82 | PREDICTED: NAC domain-containing protein 68 | ||||
TrEMBL | A0A022QZ79 | 3e-81 | A0A022QZ79_ERYGU; Uncharacterized protein | ||||
STRING | Migut.F00031.1.p | 5e-82 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13250 | 13 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-39 | NAC domain containing protein 83 |