 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
SMil_00000281-RA_Salv |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
|
| Family |
bHLH |
| Protein Properties |
Length: 149aa MW: 16443.4 Da PI: 10.4368 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SMil_00000281-RA_Salv | genome | NDCTCM | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 21.9 | 3.1e-07 | 99 | 125 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
HLH 4 ahnerErrRRdriNsafeeLrellPka 30
+h+ +Er RR++i +++ L++l+P +
SMil_00000281-RA_Salv 99 SHSLAERARREKISERMKILQDLVPGC 125
8************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 149 aa
Download sequence Send
to blast |
MLTDQRSNDD SRKRRDGDEH CAKGGGASTS SCNNNNNVSN ERRNEGDSKR MKAVGELKVE 60
GEGNSGKGAA AVERRSKLDE LPKQDYIHVR ARRGQATDSH SLAERARREK ISERMKILQD 120
LVPGCNKVRA AIKVKASVII CFTSSRKSC
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KP257482 | 0.0 | KP257482.1 Salvia miltiorrhiza clone 49 basic helix-loop-helix transcription factor mRNA, complete cds. |
