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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rsa1.0_11912.1_g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family | bZIP | ||||||||
Protein Properties | Length: 650aa MW: 71014.5 Da PI: 5.2095 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39 | 1.7e-12 | 189 | 249 | 2 | 62 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ ++ r+++NRe+A+ sRqRKk ++eeLeekv ++ + ++L +++ e a+l+++ Rsa1.0_11912.1_g00002.1 189 EDERKRARLIRNRESAQLSRQRKKHYVEELEEKVRSMHSAITDLNGKISYFMAENAALRQQ 249 55566779****************************************9999999999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.9E-16 | 188 | 252 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.208 | 190 | 250 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.6E-11 | 191 | 250 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.5E-16 | 192 | 250 | No hit | No description |
SuperFamily | SSF57959 | 3.38E-12 | 192 | 250 | No hit | No description |
CDD | cd14704 | 7.82E-21 | 193 | 244 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 650 aa Download sequence Send to blast |
MAESITEEPP PPPAPPSEFD SISIPPFDQS HHPTSDQTPI GELMSDLGFP IDPDFELTFD 60 GMEDLYLPAE DETFLIPDNA SSQEHFGDFT PPEESQGSGT SFPDDDRCFS GDDERKLDQP 120 TPLSSQGSDN CCSDVPEGVD QKVKVEEAAA TTKRKKEDTS ESDESRSSKY RRSGEQESAV 180 TNIEEEGEED ERKRARLIRN RESAQLSRQR KKHYVEELEE KVRSMHSAIT DLNGKISYFM 240 AENAALRQQL GGCPPPPMGM YPPMAYPWMP CPPPYMVKQQ GGQVPLIPIP RLKPQNTLGS 300 SKGKSKKSEA RTKKVASISF LGLLFCLFLF GALSPIVNVD YGGISGAFYG NYRSSYVTDQ 360 VVYNQHRNRV LDTSRRDSAT ESSVPPGNGS EPLAASLFVP RNDKLVKIDG NLIINSILAS 420 EKAVASRKAS ESNESSKADG VIPKDRSLAL PLPDVGMIED MAKHLIRTKA EKQKALSSGS 480 ADTLNDSIKT KAANGEMQQW FREGVAGPMF SSGMCTEVFQ FDVSSTSGAI IPASPATNVS 540 SEHRKNATDT HRRKNRRTLR GLAIPLPGSD FNFTKEHQRN SSSKEIKPAS SMVVSVLVDP 600 REGGDGDIDG MIGGPKSLSR VFVVVLQDSA KYVTYSCALP RPGAPHLVTT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:17662035, ECO:0000269|PubMed:20876872}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Rsa1.0_11912.1_g00002.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018484004.1 | 0.0 | PREDICTED: bZIP transcription factor 17 | ||||
Swissprot | O22208 | 0.0 | BZP17_ARATH; bZIP transcription factor 17 | ||||
TrEMBL | A0A3P6CZI8 | 0.0 | A0A3P6CZI8_BRAOL; Uncharacterized protein | ||||
STRING | Bo4g190610.1 | 0.0 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM8881 | 27 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 0.0 | bZIP family protein |