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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_11839.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 413aa MW: 45003.6 Da PI: 6.1809 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_11839.1_g00001.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 99 | 3e-31 | 210 | 268 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY++eHnh+
Rsa1.0_11839.1_g00001.1 210 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPNMLVITYTSEHNHP 268
699************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009555 | Biological Process | pollen development |
GO:0009793 | Biological Process | embryo development ending in seed dormancy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 413 aa
Download sequence Send
to blast |
MDNFQGDLTD VVRGIGSRHM TSSPGPPEGP SPSSLSPPLT SDFHVDFPSF ANSEMNPFGD 60 PFVSMTDPLL NLPANFSGAG DSKSNNSFAV FPNVTVDDHI KSQCSVFPRI RISQRNIIQD 120 ASKCNSPAMA TSSVAAASPW GMISVDSTNS PRNCLLVDNH NITSSSSQIQ ISSSPQNFGI 180 KRRKGQGKKV VCIPAPAAMN SRSSGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG 240 CPARKQVERS RTDPNMLVIT YTSEHNHPWP TQRNALAGST RSSSSSSSNP CSKSATATTS 300 ASSRVSQNKD EPNKSHLPFT STSHVAKTVK EEDVEKCQEN IEFDDVDDTY RPEFQHHLGD 360 FFADLDDLEE DFLTMLCTQG FSGDNSGGGN LDNKRMIPDV FSDFFDDDSS RSL
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM593147 | 0.0 | KM593147.1 Brassica oleracea var. capitata WRKY transcription factor (WRKY53) mRNA, complete cds. |