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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_09422.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 273aa MW: 30347.3 Da PI: 4.8747 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_09422.1_g00003.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 93 | 2.2e-29 | 69 | 127 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ + itY +Hnh+
Rsa1.0_09422.1_g00003.1 69 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPSKLMITYACDHNHP 127
69*************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MHRRGIQESD EEEDETYNDV VPESPSSCED TKISKPTPKK RRNMEKRVVS VPIADVEGSK 60 SRGEVYPPSD SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR VDPSKLMITY 120 ACDHNHPFPS ATNNKSHHHH HRTTAVVLKT AKKEEEDEEE EEEATVVVAE EPAGLDLSHV 180 DSPLLLGGCY SSELPEFGWF YDASISSSSG SSYGGSFMDV TLERGFSVGG EEEDESLFGD 240 LGDLPDCASV FRRGTVATEE QHFGAIPFCD SSR
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU912413 | 0.0 | EU912413.1 Brassica napus WRKY69-1 transcription factor (WRKY69-1) mRNA, complete cds. |