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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_07382.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 296aa MW: 33387.6 Da PI: 9.2097 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_07382.1_g00002.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 105.9 | 2.1e-33 | 155 | 212 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp+vv++tYeg+Hnh+
Rsa1.0_07382.1_g00002.1 155 EDGYRWRKYGQKAVKNSHYPRSYYRCTTQRCNVKKRVERSFQDPTVVITTYEGQHNHP 212
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MSNETKYLCN YQYPSSFSLH EMMNLPSSTP SSYGNSRLDP SSYSYDSLLQ KTFGLSPSSS 60 EVFNSSIDQE SKRDASNDAT GETPARVSAS SSSSEAGHPG KDSGKSQKKR ELSEDGCEEN 120 QSSKKLGKTK KMEEKKKQRE PRVSFMTKSE VDHLEDGYRW RKYGQKAVKN SHYPRSYYRC 180 TTQRCNVKKR VERSFQDPTV VITTYEGQHN HPIPTNHRGS STAAAMYSAN FMNPRSLTHE 240 MFPTAAYTSS GSAASAYGYG QSGYGNANPN SYQEYRQGEY ELLKEIFPSI FFKQER
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 123 | 136 | KKLGKTKKMEEKKK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KC246575 | 0.0 | KC246575.1 Brassica napus WRKY transcription factor 28.2 (WRKY28.2) mRNA, complete cds. |