|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Rsa1.0_07148.1_g00003.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
Family |
bZIP |
Protein Properties |
Length: 257aa MW: 27765.3 Da PI: 9.0046 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_07148.1_g00003.1 | genome | RGD | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 23 | 1.8e-07 | 197 | 219 | 5 | 27 |
CHHHCHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkae 27
+r+rr++kNRe+A rsR+RK+a
Rsa1.0_07148.1_g00003.1 197 RRQRRMIKNRESAARSRARKQAA 219
79*******************96 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MNMDELLKSI WTAEEAQAMS MTSSAAATAV AQPCGGGNLQ RQGSSTLPRT ISQKTVDETL 60 GEMTLEEFLF RAGVVCSQQT GQFNRNNNNG AAGGLGFDFG FDFADQNQNN ISFNAACSGC 120 LKPFLLNKQT RICCACGYGQ QGFHWGNSIN NNNGLAGVTV AATSPGISSA ENNSLSPVPY 180 VLNRGRSNTC LEKVTERRQR RMIKNRESAA RSRARKQAAT NLAKLLGSAE RVLSRPHCSC 240 RYCRLCKKPF PCVSDSV
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Up-regulated by abscisic acid (ABA) and cold. {ECO:0000269|PubMed:10636868}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | JQ971974 | 7e-56 | JQ971974.1 Eutrema salsugineum abscisic acid responsive elements-binding factor 4 (ABF4) mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT1G49720.2 | 1e-34 | abscisic acid responsive element-binding factor 1 |