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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_07073.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
M-type_MADS |
Protein Properties |
Length: 264aa MW: 30867.2 Da PI: 9.9375 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_07073.1_g00002.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 57.8 | 1.4e-18 | 20 | 57 | 13 | 50 |
HHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
++ R++ ++KKA+ELS+LC++ev+vi+++s g+l++++
Rsa1.0_07073.1_g00002.1 20 LTSRQENVFKKASELSILCGVEVCVIYYGSYGELKTWP 57
567**********************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 264 aa
Download sequence Send
to blast |
MASSSSSRFK KPSSSEAKRL TSRQENVFKK ASELSILCGV EVCVIYYGSY GELKTWPADR 60 EKVKDMARRY SELSETQRSK KQYDLRKVLE SIKKDDESKK KKTKTKKRAK LGSHYKYPDW 120 DPRFDNYSAE KLEELIMSLE RSQTMMQRRL GAVVEAQTQK RNMHYTNMAR QEQMMIQQRP 180 NQASMDLFNP RISTLSQSQA STSASNQAYS LAPDPLTIYQ DPCMEEMYSS TWIGQHRMSS 240 LSIRFDLCQS LKDYRNIFLY IYFA
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |