 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Rsa1.0_05929.1_g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
bHLH |
| Protein Properties |
Length: 93aa MW: 10444.8 Da PI: 10.1095 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Rsa1.0_05929.1_g00001.1 | genome | RGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 22.6 | 1.9e-07 | 20 | 62 | 14 | 54 |
HHHHHHHHHHHCTSCCC.....TTS-STCHHHHHHHHHHHHHH CS
HLH 14 driNsafeeLrellPkas..kapskKlsKaeiLekAveYIksL 54
d+iN+ +L +llP++ + +s+K+s + +L++++ YI++L
Rsa1.0_05929.1_g00001.1 20 DQINDLVLQLHRLLPELGnnNRRSGKVSASKVLQETCTYIRNL 62
79**************666899*******************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009640 | Biological Process | photomorphogenesis |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Atypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. Regulates light responses by binding and inhibiting the activity of the bHLH transcription factor HFR1, a critical regulator of light signaling and shade avoidance. May have a regulatory role in various aspects of gibberellin-dependent growth and development. {ECO:0000269|PubMed:16527868, ECO:0000269|PubMed:20305124}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Not induced by exogenous gibberellin. {ECO:0000269|PubMed:16527868}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AL049746 | 6e-54 | AL049746.1 Arabidopsis thaliana DNA chromosome 3, BAC clone T23J7. |
| GenBank | CP002686 | 6e-54 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |
