|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Rsa1.0_05825.1_g00001.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
Family |
bZIP |
Protein Properties |
Length: 367aa MW: 40535.2 Da PI: 9.8784 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_05825.1_g00001.1 | genome | RGD | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 42.4 | 1.5e-13 | 288 | 344 | 5 | 60 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelkkevaklk 60
+r++r++kNRe+A rsR+RK+a++ eLe ++++L++ N++Lk + +e +k + +lk
Rsa1.0_05825.1_g00001.1 288 RRQKRMIKNRESAARSRARKQAYTLELEAEIENLKQLNQDLKRKqAEIIKTQKNELK 344
79***************************************8651444555555555 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 367 aa
Download sequence Send
to blast |
MGTHINFNNS GVYSSGGNGS DNNQSKPLGR QSSLYSLTFD EFQSTLGEPG KEFGSMNMDE 60 LLKNIWTAEE TTQPIMTTTT TSSVQQPSSG FAPGGGSLLQ RQGSLTLPRT LSQKTVDEVW 120 KHLMSKDNCT DAPERQQTLG EMTLEDFLLR AGVVKEDSQQ NQNSSSEFCA NNGVSTGLGF 180 GFGQPSQNNI SFNSNNSSMI LNQAPATMQQ QPHQQEHQRL PPTIYPKQAN VTFAAPVMGR 240 AGVTVAASSP GTTSSAENKD WSSPVVPYVF GRQGRRSNTG VVEKVVERRQ KRMIKNRESA 300 ARSRARKQAY TLELEAEIEN LKQLNQDLKR KQAEIIKTQK NELKESSKQR PWLAKTPCLR 360 RTLTGPW
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Up-regulated by abscisic acid (ABA) and cold. {ECO:0000269|PubMed:10636868}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | JX122892 | 0.0 | JX122892.1 Brassica napus ABA-responsive element binding factor 1 (ABF1.1) mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT1G49720.1 | 1e-122 | abscisic acid responsive element-binding factor 1 |