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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_04489.1_g00005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
M-type_MADS |
Protein Properties |
Length: 356aa MW: 41021.9 Da PI: 5.4232 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_04489.1_g00005.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 62.1 | 6.1e-20 | 33 | 80 | 3 | 50 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
++++s + +++ R+ +i+KKA+EL +LCd+e++vi ++++g+l++++
Rsa1.0_04489.1_g00005.1 33 SSSYSLAATSLNSRLLTIFKKAQELTTLCDIEACVIHYGPDGELRTWP 80
799********************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 356 aa
Download sequence Send
to blast |
RESCFENQTR KGTNHATTSF FLLFFQFVSF FPSSSYSLAA TSLNSRLLTI FKKAQELTTL 60 CDIEACVIHY GPDGELRTWP ENRDKVTDLA LRYIQLDEAK RRKKSLNLYE FLNKIKKTTK 120 TTNNFKKRAK KKNVEELKYP VSDHYSVDQI NQIIHSLELS YSTLQERRRF LAAKKQNESL 180 NPSQLTPLPQ ESGLTNQELC VYDQNNNNNF QHLCVSDNSA AQESGLHYQL MPYDQNMFVG 240 NNFKDPCVSS NTQDYSVFPL ELQESVSNYG LNQLMQHELY GFDQNMCMSD ITNNFNVVDP 300 FLSNMLPDDF CFDFQDTSGG NMVGNPSFSQ VFNLDMSSSY VYENRLLLQE STLPSL
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |