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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_04448.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
NAC |
Protein Properties |
Length: 280aa MW: 31540.6 Da PI: 5.4018 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_04448.1_g00002.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 130.2 | 1.5e-40 | 6 | 136 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
+GfrF Ptdeel++++Lk+k++g +++++++i+ev+i+++eP +Lp+ ++k++++ wyf s+++ ++++++ ++r+t sg+Wk+t
Rsa1.0_04448.1_g00002.1 6 VGFRFCPTDEELINYFLKNKIQGIPCSIDDTIREVNICSYEPASLPAlsTIKSKDHVWYFLSPKEYTSTKKNVTKRTTPSGFWKST 91
7***************************99****************4458889999****************************** PP
NAM 87 gkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
g+d++v ++ +g ++g+kktLv+++g+++++++t W+mhe+++
Rsa1.0_04448.1_g00002.1 92 GNDRNVRKEkrrNGVVIGTKKTLVYHEGKSSSAVRTPWTMHEFNI 136
******9986667777***************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 280 aa
Download sequence Send
to blast |
METNIVGFRF CPTDEELINY FLKNKIQGIP CSIDDTIREV NICSYEPASL PALSTIKSKD 60 HVWYFLSPKE YTSTKKNVTK RTTPSGFWKS TGNDRNVRKE KRRNGVVIGT KKTLVYHEGK 120 SSSAVRTPWT MHEFNITCLP PVDQGNVGDI PCGSNSPEPS HSSLVTDVSN IVGAANTPPP 180 GDQAGKESLY GFSVKDVTMI MEKQDDLCPW DALCKVPDTL FIDNNDNTNV KLQAPCLAQN 240 DDEFLGGLTH VNRKHVEFLF IYDQELTTQE NCEEYMLKWF
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). Involved in salt stress response during seed germination and seedling growth. Binds the auxin-responsive IAA30 gene promoter and may serve as a molecular link that interconnects a developmental feedback loop of auxin signaling with a salt signal transduction pathway during seed germination (PubMed:21450938). {ECO:0000269|PubMed:21450938}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salt stress and abscisic acid (ABA) in roots. {ECO:0000269|PubMed:21450938}. |