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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_04287.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 555aa MW: 59918.1 Da PI: 5.7202 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_04287.1_g00003.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94.7 | 6.4e-30 | 234 | 293 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+aed +++++tYeg+H h+
Rsa1.0_04287.1_g00003.1 234 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCAEDMSILITTYEGTHSHP 293
58***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 555 aa
Download sequence Send
to blast |
MEVILKSPTS GSLLKDKVIG SAQIHEATKV EEDHQELESA KVEMSEVKEE NEKLKGMLER 60 IESDYKSLKL RFFDIIQQEP SNNQTQDQNM VDLPTATTDL SSLDQERELV SLSLGRRSSS 120 PNDNTSRKEE KTDAISKEVN ADEELTKAGL TLGFNNGSGR EPDGGLSVPN QANSSVENSS 180 EDVPGETWPP SKVTGKRSSP EPASGGDVDG DAGQQNPVKR ARVCVRARCD TPTMNDGCQW 240 RKYGQKIAKG NPCPRAYYRC TVAPGCPVRK QVQRCAEDMS ILITTYEGTH SHPLPLSATT 300 MASTTSAAAS MLLSGSSSSS SAAEIMGNNL YDNSRFINNN NSKSFYSPTL HSPLHPTVTL 360 DLTAPQHSSS SLPSLNFNKF PNSFQRFPSA SLNFSSNSSS LNSSILNLPA TWGNGYSSYT 420 PYPYNNVQFG TSNQVKTVQN NQSLTETLTK ALTSDPSFQS VIAAAISSMV GSNGEQQIVG 480 PRHPISDNVL RTAAMDNNKG RGGYFSSLLM SNTIANNQTG ASLDQTSSQP PPLSMFNNSS 540 SSPSTTSFVN KEEKS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF430078 | 0.0 | KF430078.1 Brassica rapa WRKY transcription factor 72 (WRKY72) mRNA, complete cds. |