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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_04266.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 320aa MW: 34739.1 Da PI: 10.3198 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_04266.1_g00002.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.5 | 8.9e-31 | 244 | 301 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+a+d +++++tYe +Hnh+
Rsa1.0_04266.1_g00002.1 244 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERAADDSSMLIVTYEADHNHS 301
99************************988****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005516 | Molecular Function | calmodulin binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MAVELMTRNY ISGVGVDSFA VQEAAASGLK SMENFIGLMS HESFNSNQPS SSSSSAAITD 60 LELARNTTAD AAVSKFKRVI SLLDRTRTGH ARFRRAPVIS PIQEIKPTPF QPPPPIRKGS 120 FSSPFKTIDF SSLSSLTTES EHMKHHHRPS ETAPLGTQSL STTVSSHHHR PSETAPFGTQ 180 SLSTTVSSFS KSAKRKCNSE NHITGKCASA SSGRCHCSKK RKTKQRRVIR VPAISAKMSD 240 VPPDDYSWRK YGQKPIKGSP HPRGYYKCSS VRGCPARKHV ERAADDSSML IVTYEADHNH 300 SLSAADLAGA AVADLILESS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF430036 | 0.0 | KF430036.1 Brassica rapa WRKY transcription factor 15 (WRKY15) mRNA, complete cds. |