|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Rsa1.0_03943.1_g00003.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
Family |
bZIP |
Protein Properties |
Length: 395aa MW: 44364.8 Da PI: 7.3621 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_03943.1_g00003.1 | genome | RGD | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.8 | 1.5e-10 | 197 | 255 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l l+ l+ e+
Rsa1.0_03943.1_g00003.1 197 KRAKRIWANRQSAARSKERKTRYIFELERKVQTLQTEATTLSAQLTLLQRDTNGLTVEN 255
9********************************************99998887777665 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 395 aa
Download sequence Send
to blast |
MDREKSPAPS GGLPPPSPGP INHGSEANRL NHDMSRMLEH PPKKIGHRRA HSEILTXKPR 60 YEPFDSDLGV VGGGANNAAD GASFSDYTEE DLLSMYLDMD KFNSSTATSS SAGQVGEPSW 120 KNESVMMMHH TGGSSSNPQN SFGERPTRVR HQHSHSMDGS LNMSEMLVSG DGDDSVVDAK 180 KSMSAAKLAE LALIDPKRAK RIWANRQSAA RSKERKTRYI FELERKVQTL QTEATTLSAQ 240 LTLLQRDTNG LTVENNELKL RLQTMEQQVH LQDELNEALK EEIQHLKVLT GQGASSNGAS 300 AMKYGSFGSN QQFYSNNQSM QTILAAQQLQ QLQLHSQKQQ QHQHQQQQQQ QQQQQFQFQQ 360 QQIQQLMHQR LRQQEQQNGT AEVRKQKPFH GQDES
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Putative transcription factor with an activatory role. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK353283 | 0.0 | AK353283.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-24-D07. |