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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Rsa1.0_03858.1_g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
TCP |
| Protein Properties |
Length: 350aa MW: 39414.1 Da PI: 8.8562 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Rsa1.0_03858.1_g00001.1 | genome | RGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 141.3 | 7.7e-44 | 103 | 230 | 3 | 133 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasns 85
+k+drhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL+ ++k++ik+ ++ + s+ ++++ ++s
Rsa1.0_03858.1_g00001.1 103 KKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKPSKTIEWLISKSKASIKQVKESAAASE--GgggGGKHEHLQVS-- 184
699************************************************************55555..22353333333333.. PP
TCP 86 ssgkaaksaa.kskksqksaasalnlakesrakarararertrekmrik 133
++a++++ k +k++++ + ++kesr+kar+rarert km+++
Rsa1.0_03858.1_g00001.1 185 ---ENANDETlKVSKRKTKRVDDSCKKKESREKARERARERTMVKMKMR 230
...3344444377777777777788899*******************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MFPSIDTNGY DLFDPFSLHE ATMLPSFTTH IQSPSSHHHY PLPSFPFSSD FLDESVLISK 60
FLLQQQDDVD SPRKFCKELE QEKNNEWVDG TTSEKVSPRR TGKKRDRHSK ICTAQGPRDR 120
RMRLSLQIAR KFFDLQDMLG FDKPSKTIEW LISKSKASIK QVKESAAASE GGGGGGKHEH 180
LQVSENANDE TLKVSKRKTK RVDDSCKKKE SREKARERAR ERTMVKMKMR LSGLVDTSKT 240
FSDPNQESRK TKVTGGAQVE GQNLEQERSA TNLNMDSVSI IEKFLGLTSE SSSTIFGDSE 300
ESYTSLGLIR GTVSTAGVVI PREHNTTSTA SVDKERNHIS TFSLYDYLCN
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that prevents axillary bud outgrowth. May also delay early axillary bud development. Probably involved in the auxin-induced control of apical dominance. {ECO:0000269|PubMed:17307924}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed transiently after shoot apical meristem (SAM) decapitation (release from apical dominance). {ECO:0000269|PubMed:17307924}. |
