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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_03479.1_g00004.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 139aa MW: 15356 Da PI: 8.4721 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_03479.1_g00004.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 35.4 | 2.4e-11 | 20 | 72 | 2 | 54 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54
++ ++ +rk++NR +ArrsR RK++ ++ L+ v L eN++ + ++
Rsa1.0_03479.1_g00004.1 20 SDERKRKRKESNRDSARRSRMRKQKHLDDLTAQVTHLRDENSKIVASITVTRQ 72
5667899**********************************987766665555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 139 aa
Download sequence Send
to blast |
MGSPTSGNCS SGIQNYGSES DERKRKRKES NRDSARRSRM RKQKHLDDLT AQVTHLRDEN 60 SKIVASITVT RQHYVTIETE NSVLRAQFLE LDQRLDSLNE IVETAGGFWM ETGQGGGGAI 120 SYGRGGGGFY DGVMNPLSI
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 22 | 27 | RKRKRK |
2 | 22 | 28 | RKRKRKE |
3 | 22 | 43 | RKRKRKESNRDSARRSRMRKQK |
4 | 35 | 42 | RRSRMRKQ |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}. |