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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_03407.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 299aa MW: 33883.3 Da PI: 6.1876 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_03407.1_g00003.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 33.8 | 7.3e-11 | 182 | 225 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
kr +r NR +A+rsR RK+++i eLe+ v +L++e + L +
Rsa1.0_03407.1_g00003.1 182 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQSEVSVLSPR 225
8999********************************98777655 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MAQLPPKIPN MTPPHWPNFS SQKLPHFSTA AASSAVQNPS WVDEFLDFSA CRRGNHRRSI 60 SDSIAFLEAP IVTSHMEEHN FDKFDDEQFM SMFTDDDDDL CNHPSHNNKN VGPNDSSLNT 120 STGADHKSFN DDKEPPSHHN MNVNYNNCNE EVTGQCKTEP EDGTESSNNS GDSSGNRIID 180 PKRVKRILAN RQSAQRSRVR KLQYISELER SVTTLQSEVS VLSPRVAFLD HQRLLLNVDN 240 SALKQRIAAL AQDKIFKDAH QESLKREIER LRQVYQQQSF EKMENANHSP ETGVDIKAL
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269|PubMed:17719007, ECO:0000269|PubMed:19449183}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC241104 | 0.0 | AC241104.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH017L09, complete sequence. |