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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_03315.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
bZIP |
Protein Properties |
Length: 363aa MW: 41620.2 Da PI: 9.0361 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_03315.1_g00001.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 33.4 | 9.9e-11 | 77 | 112 | 3 | 38 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38
++k rr+++NReAAr+sR+RKka++++Le+ +L
Rsa1.0_03315.1_g00001.1 77 PDKTRRRLAQNREAARKSRLRKKAYVQQLETSRLKL 112
58999*************************865444 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009409 | Biological Process | response to cold |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 363 aa
Download sequence Send
to blast |
MNTTSTHVVP PRRFEIYETT TLSQVSMWEE SFKNNGGIYT PNSIVIPTNG KPDSLSEDTS 60 NGTPHKFDQE ASTSRHPDKT RRRLAQNREA ARKSRLRKKA YVQQLETSRL KLIHLEQELN 120 RARQQGFYEG NRVDTNALGF SDKMSSGIVA FEMEYGHWVQ EQNRQITELR TVLHGQVSDV 180 ELRLLVDNAM KHYFQLFRMK SAAAKIDVFY IMSGMWKTSA ERFFLWIGGF RPSELLKVLL 240 PHFDPLMDQQ VLDVCNLRQS CQQAEDAVSQ GMEKLQHTLA DSVAAGNLGE GSYIPQITCA 300 MERLEALVSF VNQADHLRHE TLQQMHRILT TRQAARGLLA LGEYFQRLRA LSSSWATRQR 360 EPT
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK353085 | 0.0 | AK353085.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-10-F22. |