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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_03141.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 560aa MW: 61214.1 Da PI: 6.1314 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_03141.1_g00003.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 99.5 | 2e-31 | 185 | 242 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK vkgse+prsYY+Ct+++C+vkkkvers+ +++++ei+Y +Hnh+k
Rsa1.0_03141.1_g00003.1 185 DDGYNWRKYGQKLVKGSEYPRSYYKCTHPNCEVKKKVERSR-EGHITEIIYAKNHNHPK 242
8****************************************.***************85 PP
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2 | WRKY | 99.6 | 2e-31 | 363 | 420 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK+vkg+++prsYY+Ct +gC v+k+ver+++d + v +tY g+H+he
Rsa1.0_03141.1_g00003.1 363 EDGYRWRKYGQKVVKGNPNPRSYYKCTANGCIVTKHVERASDDLTSVLTTYIGKHTHE 420
8********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009409 | Biological Process | response to cold |
GO:0009555 | Biological Process | pollen development |
GO:0009846 | Biological Process | pollen germination |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 560 aa
Download sequence Send
to blast |
MKRLSPKLKL NLGLVMAGFS NNLAVLGEWR DCSPNQRKRS KAELDREVSL EEDVKDDKDF 60 LQTMFQEKPC CYSRGGLSER IAARSGFNVP TSINTESSTL GSLCLNISSP GVSPASLLES 120 PVFLSNPLLS PTTGKLSYLP SDHKAKDEFF DPTTIGLEPD DSQAYEQTHD IGLGDSMASS 180 GAPADDGYNW RKYGQKLVKG SEYPRSYYKC THPNCEVKKK VERSREGHIT EIIYAKNHNH 240 PKPSPNRRSG IGSSGTCNDM QLDGTEQQES FAGTDENVEW TSPVSHSGSM QVQSGTQFGY 300 GDAAFFNVEG EEERTSHMSL SIGGNGEADE SEPKRRKLEA CASRTTREPK VVLQTTSDID 360 ILEDGYRWRK YGQKVVKGNP NPRSYYKCTA NGCIVTKHVE RASDDLTSVL TTYIGKHTHE 420 VPAARNNSSH LSPGSSGTIP GGLATQTQNH QVHYPVPHSS SEGMVTANSS LFDFQTPMRP 480 PPWAGFSAYG GETELLGLSI SGLAIGQERF TGLPTPAIGD TAEMMLQLPA EPKVEPVSQQ 540 ELGLSRSSLI YSDMSRLPQI
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |