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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_03055.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 383aa MW: 42784.7 Da PI: 7.8453 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_03055.1_g00001.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 85.9 | 3.7e-27 | 208 | 267 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-.SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkvers.aedpkvveitYegeHnhe 59
+Dg++WrKYGqK+ k ++ prsYYrC+++ +Cpv+k+v+r+ ++d+++ +tYeg+H+h+
Rsa1.0_03055.1_g00001.1 208 NDGCQWRKYGQKTAKTNPLPRSYYRCSMStNCPVRKQVQRCgEDDTSAYMTTYEGNHDHP 267
8***************************99**********934578899**********7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MIKEETSSCV HPSDGVMAES DKEVELGATK AKLDKVKEEN EKLKLLLSTV LAEYSSLQMH 60 LSNVVRQQHE ASTKLDGNGH EDLDVDISLR LGRSEQKISK EEEEVKKIIA ENISIEKKKG 120 SEKKRSAYGL GFRIQSFEDP NTERTMKLDY LFREVKNKDV ENKCLSSRKD FKTARNEDHH 180 EVLEGHEQPG LKKTRVCVKA PCDDPSINDG CQWRKYGQKT AKTNPLPRSY YRCSMSTNCP 240 VRKQVQRCGE DDTSAYMTTY EGNHDHPLPM EATHMAAGTS AAASLLQTGS SSSSSLSHFF 300 PFHHFSVSTT NSHPTVTLDL TQPNYDPNQL PNYPLSSSSL SFSSSARPSS SKSHTLSFSG 360 LKSQAPFNTY SNLSHKTRLS GQQ
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF430052 | 0.0 | KF430052.1 Brassica rapa WRKY transcription factor 36 (WRKY36) mRNA, complete cds. |