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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_02945.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 261aa MW: 30139.2 Da PI: 6.6368 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_02945.1_g00002.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 71.4 | 1.2e-22 | 113 | 173 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+Dg+ WrKYGqK++k++++ rsYY+C+++ +C++kk+v+ +++p + +tY g+H+++
Rsa1.0_02945.1_g00002.1 113 HDGFLWRKYGQKQIKEANHQRSYYKCAYTkdqNCEAKKQVQMIQHNPPLYSTTYFGHHTCQ 173
6**************************988899**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 261 aa
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to blast |
MKSSQENAVE TLLHGHGCAN QLKLIMDQAK LDSSMEREDL AKSVLHCFSD ALSILIDTND 60 HHHQDDRSNN SPPQDSSPVL ENSRRPLHKR GRKTSVAESS DYRRHESPNP IYHDGFLWRK 120 YGQKQIKEAN HQRSYYKCAY TKDQNCEAKK QVQMIQHNPP LYSTTYFGHH TCQLHQAYAS 180 FPIDTSDPLD SHMIRFDHPD FSIHQHQNQS QNQIIYLKDE NMTLPDKAEE CSSPSQWMSS 240 EVAHAVEAFE FNPFRTSSDL S
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |