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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_02766.1_g00006.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 477aa MW: 52096.6 Da PI: 8.209 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_02766.1_g00006.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 105.2 | 3.4e-33 | 225 | 281 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK+vkgs+fprsYY+Ct + Cpvkkkvers d++v+ei+Y+g+H he
Rsa1.0_02766.1_g00006.1 225 DDGYNWRKYGQKQVKGSDFPRSYYKCTNPACPVKKKVERSV-DGQVTEIIYKGQHSHE 281
8****************************************.***************8 PP
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2 | WRKY | 105.5 | 2.7e-33 | 380 | 438 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC v+k+ver+a+dpk+v++tYeg+Hnh+
Rsa1.0_02766.1_g00006.1 380 LDDGYRWRKYGQKVVKGNPYPRSYYKCTTAGCGVRKHVERAANDPKAVVTTYEGKHNHD 438
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 477 aa
Download sequence Send
to blast |
MAGKEEEEQQ KQQKSSTGVA SRPTISLPPR PFGEMFYSGG VGFSGFSPGP MTLVSNMFSD 60 PNEFKSFSQL LAGAMASPAA AAAVGAGAHQ TPVSSVGGGG DSLLDPRFKQ NRPTGLMTTQ 120 PPAMFQVPPG LSPATLLDSP SFFGLFSPIQ GSFGMMTHQQ ALAQVTAQAV QGNNSAQIQS 180 ESSTQQQQTS MTEVPSLPAP AQRDDSEVSV YEHRPQPQHA DKPADDGYNW RKYGQKQVKG 240 SDFPRSYYKC TNPACPVKKK VERSVDGQVT EIIYKGQHSH EPPQNSKRGR DINGSCNSLN 300 KSKRDQETSQ VTTTEQISEA SDSEEVGNVE TSLGGTHEED EPDPKRRNTE VRVSEPVSST 360 NRTVTEPRII VQTRSEVDLL DDGYRWRKYG QKVVKGNPYP RSYYKCTTAG CGVRKHVERA 420 ANDPKAVVTT YEGKHNHDVP AGRTSSHQLR PNNNPSTVNL NQQQTVARLR LKEEQIT
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF430027 | 0.0 | KF430027.1 Brassica rapa WRKY transcription factor 3 (WRKY3) mRNA, complete cds. |