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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_02621.1_g00010.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
ERF |
Protein Properties |
Length: 243aa MW: 26926.8 Da PI: 5.5039 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_02621.1_g00010.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.2 | 4.8e-19 | 132 | 182 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp +ng +r++lg+f tae+Aa a+++a+ +++g
Rsa1.0_02621.1_g00010.1 132 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAAFAYDRAAFRMRG 182
8********.***********9987..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0001944 | Biological Process | vasculature development |
GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0051301 | Biological Process | cell division |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MMYRQTEAES DYALLESIRR HLLGGEAELR FTESTPSSCF TESWGDLPLQ ENDSEDMLVY 60 GLLNDAFNGA YDTSSPSSDL SCITDLLDLE PSSKRQTNPS QSDSPVVKAE PSESFAAAEA 120 EKPKAATAKG KHYRGVRQRP WGKFAAEIRD PAKNGARVWL GTFETAEDAA FAYDRAAFRM 180 RGSRALLNFP LRVNSGEPDP VRITSKRSYT SSSSSSSSEN GKLKRRRKTE NGQSEFQVKC 240 EVV
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Functional Description ? help
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Source |
Description |
UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Involved in disease resistance pathways. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630, ECO:0000269|PubMed:9756931}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by jasmonate (JA) and Alternaria brassicicola (locally and systemically). Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2) while wounding induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FJ788942 | 0.0 | FJ788942.1 Brassica carinata ERF2 transcription factor (ERF2.2) mRNA, complete cds. |