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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Rsa1.0_02438.1_g00008.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family |
WRKY |
Protein Properties |
Length: 256aa MW: 28432.1 Da PI: 7.8312 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Rsa1.0_02438.1_g00008.1 | genome | RGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 46.1 | 9.5e-15 | 138 | 180 | 20 | 59 |
S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
r+YYrCt++ +Cp+kk+v+r ++dp ++ +tY+g+H+++
Rsa1.0_02438.1_g00008.1 138 RRRAYYRCTHQklyNCPAKKQVQRLNDDPFTFRVTYRGSHTCH 180
4599*******999***************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MEEVMSIIFR GLKLVDELKS SLQEKSPEAL STYLDEITKT FCDAKERLKI VLVIRNSETA 60 MNQLKPAIAA CSDQMLMQIE PGLMQEYWLR YGGSTSSQGT EAVTQRQLMA VKGDGGRNLM 120 ATERSGGSGS GSSTPRQRRR AYYRCTHQKL YNCPAKKQVQ RLNDDPFTFR VTYRGSHTCH 180 IYSTAPTIST AAPTAPIATT ATTSHPVDYG PFFDMAEAMM FGSSGSGANM DFIFPCNDPP 240 PHNHFYRRPE DGDGDK
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Publications
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- Ramírez V,López A,Mauch-Mani B,Gil MJ,Vera P
An extracellular subtilase switch for immune priming in Arabidopsis. PLoS Pathog., 2013. 9(6): p. e1003445 [PMID:23818851] - Ramírez V,López A,Mauch-Mani B,Gil MJ,Vera P
Correction: An Extracellular Subtilase Switch for Immune Priming in Arabidopsis. PLoS Pathog., 2016. 12(11): p. e1006003 [PMID:27806116]
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